• Sand Volleyball League
    August 25 8:00am
    Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Wednesdays and Thursdays Women's Leauge plays on Wednesdays and Thursdays more »
  • 7v7 Soccer League
    August 25 8:00am
    Plays begning on September 11 to October 10. Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Sundays and Wednesdays Octane Lea more »
  • Canvas: Basics for Students
    August 25 1:30pm
    This workshop lasts 60 minutes. This workshop provides a brief overview of some of the most common Canvas activities for students, as well as an introduction to other resources that are available to help you.   more »
  • Intramural Flag Football League Deadline
    August 25 4:00pm
    Deadline for Intramural Flag Football League is September 7th at 5:00 pm.  Team Fee is $80.00.  Leauge play goes from September 11th to October 25th Open to students, faculty and staff of IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants will be required to more »
  • Go Greek!
    August 25 7:00pm
    Attend either Go Greek! Information Night to learn about IUPUI's fraternities and sororities, how to join a fraternity or sorority, and the benefits and expectations of being a member.  You will be able to meet members from each of the 22 fraternities and sororities and learn more about their values. more »
Thursday, August 25, 2016
    IU Calendar




    • Sand Volleyball League
      August 25 8:00am
      Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Wednesdays and Thursdays Women's Leauge plays on Wednesdays and Thursdays more »
    • 7v7 Soccer League
      August 25 8:00am
      Plays begning on September 11 to October 10. Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Sundays and Wednesdays Octane Lea more »
    • Canvas: Basics for Students
      August 25 1:30pm
      This workshop lasts 60 minutes. This workshop provides a brief overview of some of the most common Canvas activities for students, as well as an introduction to other resources that are available to help you.   more »
    • Intramural Flag Football League Deadline
      August 25 4:00pm
      Deadline for Intramural Flag Football League is September 7th at 5:00 pm.  Team Fee is $80.00.  Leauge play goes from September 11th to October 25th Open to students, faculty and staff of IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants will be required to more »
    • Go Greek!
      August 25 7:00pm
      Attend either Go Greek! Information Night to learn about IUPUI's fraternities and sororities, how to join a fraternity or sorority, and the benefits and expectations of being a member.  You will be able to meet members from each of the 22 fraternities and sororities and learn more about their values. more »
    Thursday, August 25, 2016
      IU Calendar




      • Sand Volleyball League
        August 25 8:00am
        Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Wednesdays and Thursdays Women's Leauge plays on Wednesdays and Thursdays more »
      • 7v7 Soccer League
        August 25 8:00am
        Plays begning on September 11 to October 10. Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Sundays and Wednesdays Octane Lea more »
      • Canvas: Basics for Students
        August 25 1:30pm
        This workshop lasts 60 minutes. This workshop provides a brief overview of some of the most common Canvas activities for students, as well as an introduction to other resources that are available to help you.   more »
      • Intramural Flag Football League Deadline
        August 25 4:00pm
        Deadline for Intramural Flag Football League is September 7th at 5:00 pm.  Team Fee is $80.00.  Leauge play goes from September 11th to October 25th Open to students, faculty and staff of IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants will be required to more »
      • Go Greek!
        August 25 7:00pm
        Attend either Go Greek! Information Night to learn about IUPUI's fraternities and sororities, how to join a fraternity or sorority, and the benefits and expectations of being a member.  You will be able to meet members from each of the 22 fraternities and sororities and learn more about their values. more »
      Thursday, August 25, 2016
        IU Calendar




        • Sand Volleyball League
          August 25 8:00am
          Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Wednesdays and Thursdays Women's Leauge plays on Wednesdays and Thursdays more »
        • 7v7 Soccer League
          August 25 8:00am
          Plays begning on September 11 to October 10. Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Sundays and Wednesdays Octane Lea more »
        • Canvas: Basics for Students
          August 25 1:30pm
          This workshop lasts 60 minutes. This workshop provides a brief overview of some of the most common Canvas activities for students, as well as an introduction to other resources that are available to help you.   more »
        • Intramural Flag Football League Deadline
          August 25 4:00pm
          Deadline for Intramural Flag Football League is September 7th at 5:00 pm.  Team Fee is $80.00.  Leauge play goes from September 11th to October 25th Open to students, faculty and staff of IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants will be required to more »
        • Go Greek!
          August 25 7:00pm
          Attend either Go Greek! Information Night to learn about IUPUI's fraternities and sororities, how to join a fraternity or sorority, and the benefits and expectations of being a member.  You will be able to meet members from each of the 22 fraternities and sororities and learn more about their values. more »
        Thursday, August 25, 2016

          About This Event

          Summary

          Yogesh Pandit, Master’s in Bioinformatics Thesis Defense

          Title: Context Specific Text Mining For Annotating Protein Interactions With Experimental Evidence

          Thesis committee:

          • Mathew Palakal, Ph.D., Chair

          • Yunlong Liu, Ph.D.

          • Xiaowen Liu, Ph.D.

          Abstract:

          Proteins are the building blocks in a biological system. They interact with other proteins to make unique biological phenomenon. Protein-protein interactions play a valuable role in understanding the molecular mechanisms occurring in any biological system. Protein interaction databases are a rich source on protein interaction related information. They gather large amounts of information from published literature to enrich their data. Expert curators put in most of these efforts manually. The amount of accessible and publicly available literature is growing very rapidly. Manual annotation is a time consuming process. And with the rate at which available information is growing, it cannot be dealt with only manual curation. There need to be tools to process this huge amounts of data to bring out valuable gist than can help curators proceed faster. In case of extracting protein-protein interaction evidences from literature, just a mere mention of a certain protein by look-up approaches cannot help validate the interaction. Supporting protein interaction information with experimental evidence can help this cause. Also to avoid redundancy in curation efforts and for ease of accessibility, efforts are being put to relate manually curated information to standardized ontologies. In this study, we are applying machine learning based classification techniques to classify any given protein interaction related document into an interaction detection method. We use biological attributes and experimental factors, different combination of which define any particular interaction detection method. Then using predicted detection methods, proteins identified using named entity recognition techniques and decomposing the parts-of-speech composition we search for sentences with experimental evidence for a protein-protein interaction. We report an accuracy of 75.1% with a F-score of 47.6% on a dataset containing 2035 training documents and 300 test documents.

          Bookmark and Share
          Contact Information

          Mary O'Neill
          moneill@iupui.edu

          Event Site --- None ---
          Registration --- None ---

          Event Schedule

          There are no upcoming dates for this event.

          IU Calendar




          • Sand Volleyball League
            August 25 8:00am
            Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Wednesdays and Thursdays Women's Leauge plays on Wednesdays and Thursdays more »
          • 7v7 Soccer League
            August 25 8:00am
            Plays begning on September 11 to October 10. Team Entry fee is $80.00.  Deadline for team entry is September 7th All intramural participants will be required to create an account on IMLeagues.com/iupui.   www.imleagues.com/iupui Co-Rec Leagues plays on Sundays and Wednesdays Octane Lea more »
          • Canvas: Basics for Students
            August 25 1:30pm
            This workshop lasts 60 minutes. This workshop provides a brief overview of some of the most common Canvas activities for students, as well as an introduction to other resources that are available to help you.   more »
          • Intramural Flag Football League Deadline
            August 25 4:00pm
            Deadline for Intramural Flag Football League is September 7th at 5:00 pm.  Team Fee is $80.00.  Leauge play goes from September 11th to October 25th Open to students, faculty and staff of IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants will be required to more »
          • Go Greek!
            August 25 7:00pm
            Attend either Go Greek! Information Night to learn about IUPUI's fraternities and sororities, how to join a fraternity or sorority, and the benefits and expectations of being a member.  You will be able to meet members from each of the 22 fraternities and sororities and learn more about their values. more »
          Thursday, August 25, 2016