• 7v7 Soccer League
    September 27 12:00am
    Play runs Sept. 11 to Oct. 10. All intramural participants must create an account on IMLeagues.com/iupui. Co-Rec Leagues play on Sundays and Wednesdays. Octane League plays on Sundays. Recreation League plays on Tuesdays. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
  • Bubble Ball/Knocker Ball
    September 27 12:00am
    New intramural sport where participants climb into a bublle and play, bounce, roll, and enjoy the excitement. Team entry fee is $60. All intramurals participants are required to create an account on IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
  • Competition Pool
    September 27 5:30am
    The competition pool for lap swim is open more »
  • Intramural Flag Football League
    September 27 4:00pm
    League play goes from Sept. 11 to Oct. 25. Open to students, faculty and staff at IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants are required to create an account and sign up at IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 more »
  • Game Room Tournament: 9-Ball
    September 27 5:00pm
    Test your skills on our new pool table! Light refreshments will be served and prizes awarded to the 1st and 2nd place winners.  Register in the game room more »
Tuesday, September 27, 2016
    IU Calendar




    • 7v7 Soccer League
      September 27 12:00am
      Play runs Sept. 11 to Oct. 10. All intramural participants must create an account on IMLeagues.com/iupui. Co-Rec Leagues play on Sundays and Wednesdays. Octane League plays on Sundays. Recreation League plays on Tuesdays. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
    • Bubble Ball/Knocker Ball
      September 27 12:00am
      New intramural sport where participants climb into a bublle and play, bounce, roll, and enjoy the excitement. Team entry fee is $60. All intramurals participants are required to create an account on IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
    • Competition Pool
      September 27 5:30am
      The competition pool for lap swim is open more »
    • Intramural Flag Football League
      September 27 4:00pm
      League play goes from Sept. 11 to Oct. 25. Open to students, faculty and staff at IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants are required to create an account and sign up at IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 more »
    • Game Room Tournament: 9-Ball
      September 27 5:00pm
      Test your skills on our new pool table! Light refreshments will be served and prizes awarded to the 1st and 2nd place winners.  Register in the game room more »
    Tuesday, September 27, 2016
      IU Calendar




      • 7v7 Soccer League
        September 27 12:00am
        Play runs Sept. 11 to Oct. 10. All intramural participants must create an account on IMLeagues.com/iupui. Co-Rec Leagues play on Sundays and Wednesdays. Octane League plays on Sundays. Recreation League plays on Tuesdays. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
      • Bubble Ball/Knocker Ball
        September 27 12:00am
        New intramural sport where participants climb into a bublle and play, bounce, roll, and enjoy the excitement. Team entry fee is $60. All intramurals participants are required to create an account on IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
      • Competition Pool
        September 27 5:30am
        The competition pool for lap swim is open more »
      • Intramural Flag Football League
        September 27 4:00pm
        League play goes from Sept. 11 to Oct. 25. Open to students, faculty and staff at IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants are required to create an account and sign up at IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 more »
      • Game Room Tournament: 9-Ball
        September 27 5:00pm
        Test your skills on our new pool table! Light refreshments will be served and prizes awarded to the 1st and 2nd place winners.  Register in the game room more »
      Tuesday, September 27, 2016
        IU Calendar




        • 7v7 Soccer League
          September 27 12:00am
          Play runs Sept. 11 to Oct. 10. All intramural participants must create an account on IMLeagues.com/iupui. Co-Rec Leagues play on Sundays and Wednesdays. Octane League plays on Sundays. Recreation League plays on Tuesdays. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
        • Bubble Ball/Knocker Ball
          September 27 12:00am
          New intramural sport where participants climb into a bublle and play, bounce, roll, and enjoy the excitement. Team entry fee is $60. All intramurals participants are required to create an account on IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
        • Competition Pool
          September 27 5:30am
          The competition pool for lap swim is open more »
        • Intramural Flag Football League
          September 27 4:00pm
          League play goes from Sept. 11 to Oct. 25. Open to students, faculty and staff at IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants are required to create an account and sign up at IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 more »
        • Game Room Tournament: 9-Ball
          September 27 5:00pm
          Test your skills on our new pool table! Light refreshments will be served and prizes awarded to the 1st and 2nd place winners.  Register in the game room more »
        Tuesday, September 27, 2016

          About This Event

          Summary

          Yogesh Pandit, Master’s in Bioinformatics Thesis Defense

          Title: Context Specific Text Mining For Annotating Protein Interactions With Experimental Evidence

          Thesis committee:

          • Mathew Palakal, Ph.D., Chair

          • Yunlong Liu, Ph.D.

          • Xiaowen Liu, Ph.D.

          Abstract:

          Proteins are the building blocks in a biological system. They interact with other proteins to make unique biological phenomenon. Protein-protein interactions play a valuable role in understanding the molecular mechanisms occurring in any biological system. Protein interaction databases are a rich source on protein interaction related information. They gather large amounts of information from published literature to enrich their data. Expert curators put in most of these efforts manually. The amount of accessible and publicly available literature is growing very rapidly. Manual annotation is a time consuming process. And with the rate at which available information is growing, it cannot be dealt with only manual curation. There need to be tools to process this huge amounts of data to bring out valuable gist than can help curators proceed faster. In case of extracting protein-protein interaction evidences from literature, just a mere mention of a certain protein by look-up approaches cannot help validate the interaction. Supporting protein interaction information with experimental evidence can help this cause. Also to avoid redundancy in curation efforts and for ease of accessibility, efforts are being put to relate manually curated information to standardized ontologies. In this study, we are applying machine learning based classification techniques to classify any given protein interaction related document into an interaction detection method. We use biological attributes and experimental factors, different combination of which define any particular interaction detection method. Then using predicted detection methods, proteins identified using named entity recognition techniques and decomposing the parts-of-speech composition we search for sentences with experimental evidence for a protein-protein interaction. We report an accuracy of 75.1% with a F-score of 47.6% on a dataset containing 2035 training documents and 300 test documents.

          Bookmark and Share
          Contact Information

          Mary O'Neill
          moneill@iupui.edu

          Event Site --- None ---
          Registration --- None ---

          Event Schedule

          There are no upcoming dates for this event.

          IU Calendar




          • 7v7 Soccer League
            September 27 12:00am
            Play runs Sept. 11 to Oct. 10. All intramural participants must create an account on IMLeagues.com/iupui. Co-Rec Leagues play on Sundays and Wednesdays. Octane League plays on Sundays. Recreation League plays on Tuesdays. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
          • Bubble Ball/Knocker Ball
            September 27 12:00am
            New intramural sport where participants climb into a bublle and play, bounce, roll, and enjoy the excitement. Team entry fee is $60. All intramurals participants are required to create an account on IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 - mj221@iupui.edu. more »
          • Competition Pool
            September 27 5:30am
            The competition pool for lap swim is open more »
          • Intramural Flag Football League
            September 27 4:00pm
            League play goes from Sept. 11 to Oct. 25. Open to students, faculty and staff at IUPUI. All participants must have paid the $15 semester recreation fee. All intramural participants are required to create an account and sign up at IMLeagues.com/iupui. Questions? Contact Matthew Jones - Coordinator of Intramural Sports - 317.278.9939 more »
          • Game Room Tournament: 9-Ball
            September 27 5:00pm
            Test your skills on our new pool table! Light refreshments will be served and prizes awarded to the 1st and 2nd place winners.  Register in the game room more »
          Tuesday, September 27, 2016